BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025H11LP1|AL428466
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1547 1705 0.0
>3x_Contig1547
Length = 9547
Score = 1705 bits (859), Expect = 0.0
Identities = 870/873 (99%), Gaps = 1/873 (0%)
Strand = Plus / Plus
Query: 11 ttgtatctaccgatgcatcgctgatacttccttgatcttgggcagaagaaagagtatctg 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4063 ttgtatctaccgatgcatcgctgatacttccttgatcttgggcagaagaaagagtatctg 4122
Query: 71 ctttgatatttgcaacggagtygttgncaaacttttataagagcgctgatccattcttct 130
||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||
Sbjct: 4123 ctttgatatttgcaacggagttgctg-caaacttttataagagcgctgatccattcttct 4181
Query: 131 cgttgtttggcggtttcagcgccaaaataatgcctggatgtgctagaaagaccgctcttc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4182 cgttgtttggcggtttcagcgccaaaataatgcctggatgtgctagaaagaccgctcttc 4241
Query: 191 tttggttcattcaaaataaacccatttttagtgccgtacttatcatcaggtaaattcgct 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4242 tttggttcattcaaaataaacccatttttagtgccgtacttatcatcaggtaaattcgct 4301
Query: 251 tgtaattcaattgtactacttaccaacttgatgctctccactagattttcttgatcgaat 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4302 tgtaattcaattgtactacttaccaacttgatgctctccactagattttcttgatcgaat 4361
Query: 311 aataacaaagtttgatcctcaattacagcttgtcgtactttccaagaattaccgctaccc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4362 aataacaaagtttgatcctcaattacagcttgtcgtactttccaagaattaccgctaccc 4421
Query: 371 aacgccttatttttgcgtaccaaaagtaccccttcttttacgctgtcagtcattccaatt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4422 aacgccttatttttgcgtaccaaaagtaccccttcttttacgctgtcagtcattccaatt 4481
Query: 431 ggtacggagattgcggtatctgtactaataaattgtgcaagttttagagacatcactggt 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4482 ggtacggagattgcggtatctgtactaataaattgtgcaagttttagagacatcactggt 4541
Query: 491 gataggttactaagttcaaagagtgctaataaataatctgttaataactcccttctcaaa 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4542 gataggttactaagttcaaagagtgctaataaataatctgttaataactcccttctcaaa 4601
Query: 551 tcgactttaacaggaacagtagtctgaaatagttgctttttaggtagttccgggagatga 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4602 tcgactttaacaggaacagtagtctgaaatagttgctttttaggtagttccgggagatga 4661
Query: 611 tattgctccatgagccttattttcaacatatggtcaagctcgtataactggtccagagat 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4662 tattgctccatgagccttattttcaacatatggtcaagctcgtataactggtccagagat 4721
Query: 671 ttcgcaaacttgaacatctctttagatgatttcttatcaatgacactgcagagtatacac 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4722 ttcgcaaacttgaacatctctttagatgatttcttatcaatgacactgcagagtatacac 4781
Query: 731 ttgcttgcatcctcaggattactgtacaaagtgctagaagcttcgacagctattgttgaa 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4782 ttgcttgcatcctcaggattactgtacaaagtgctagaagcttcgacagctattgttgaa 4841
Query: 791 aagtcttctggttgtacaaatagaggtatatcagatatgatgttgggtgagtgtaaaaca 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4842 aagtcttctggttgtacaaatagaggtatatcagatatgatgttgggtgagtgtaaaaca 4901
Query: 851 ctgtcggattgcggtacttctccattataagga 883
|||||||||||||||||||||||||||||||||
Sbjct: 4902 ctgtcggattgcggtacttctccattataagga 4934
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6269
Number of Sequences: 1807
Number of extensions: 6269
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)